M.Sc. Adriana Żyła

Degree: 
Master's degree: Biophysics, Adam Mickiewicz University in Poznań, Poland, 2016
Bachelor's degree: Biology, University of Opole, Poland, 2014
Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology in Warsaw, Poland [Bioinformatic, (July 2016 - April 2018])
+48 721 085 797
adrzyl@amu.edu.pl
Supervisor: Prof. Maciej Kozak
Department: Department of Macromolecular Physics, Faculty of physics / NanoBioMedical Centre, Adam Mickiewicz University in Poznań, Poland

Research interests: 
  • Structural biology
  • Biophysics
  • Angular X-ray and neutron scattering
  • BStructural bioinformatics
  • Molecular biology
Selected publications: 
  • P. Boccaletto, M. Magnus, C. Almeida, A. Żyła, Astha, R. Pluta, B. Bagiński, E. Jankowska, S. Dunin-Horkawicz, T.K. Wirecki, M.J. Boniecki, F. Stefaniak, J.M. Bujnicki, RNArchitecture: a database and a classification system of RNA families, with a focus on structural information, NAR 2017, gkx966, https://doi.org/10.1093/nar/gkx966 
  • P. Piątkowski, J. Jablonska, A. Żyła, D. Niedziałek, D. Matelska, E. Jankowska, T. Waleń,W. Dawson, J. Bujnicki, SupeRNAlign: a new tool for flexible superposition of homologous RNA structures and inference of accurate structure-based sequence alignments”, NAR-02758-Met-H- 2016.R1m, 2017, doi.: 10.1093/nar/gkx631 
  • A. Buczek, T. Kupka, M. A. Broda, A. Żyła, Predicting the structure and vibrational frequencies of ethylene using harmonic and anharmonic approaches at the Kohn–Sham complete basis set limit”, J Mol Model. 2016; 22: 42., doi: 10.1007/s00894-015-2902-z 
  • Miao Z, Adamiak RW, Antczak M, Boniecki MJ, Bujnicki JM, Chen SJ, Cheng CY, Cheng Y, Chou FC, Das R, Dokholyan NV, Ding F, Geniesse C, Jiang Y, Joshi A, Krokhotin A, Magnus M, Mailhot O, Major F, Mann TH, Piatkowski P, Pluta R, Popenda M, Sarzynska J, Sun L, Szachniuk M, Tian S, Wang J, Wang J, Watkins AM, Wiedemann J, Xiao Y, Xu X, Yesselman JD, Zhang D, Zhang Y, Zhang Z, Zhao C, Zhao P, Zhou Y, Zok T, Zyla A, Ren A, Batey RT, Golden BL, Huang L, Lilley DM, Liu Y, Patel DJ, Westhof E, RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers.”,. RNA Journal 2020, doi: 10.1261/rna.075341.120

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